pypop-0.7.0-alt2_16.i586.rpm


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Description

pypop - Python for Population Genomics

Property Value
Distribution ALT Linux Sisyphus
Repository Autoimports i586
Package name pypop
Package version 0.7.0
Package release alt2_16
Package architecture i586
Package type rpm
Installed size 1008.62 KB
Download size 1008.62 KB
Official Mirror ftp.altlinux.org
PyPop is a bioinformatics framework for performing population genomics
analysis, particularly on large-scale multilocus genotype data.

Alternatives

Package Version Architecture Repository
pypop-0.7.0-alt2_16.x86_64.rpm 0.7.0 x86_64 Autoimports
pypop - - -

Requires

Name Value
/usr/bin/python -
/usr/lib/python2.7/site-packages -
libc.so.6(GLIBC_2.0) -
libc.so.6(GLIBC_2.1) -
libc.so.6(GLIBC_2.1.3) -
libc.so.6(GLIBC_2.3.4) -
libc.so.6(GLIBC_2.4) -
libc.so.6(GLIBC_2.7) -
libgsl.so.0 -
libpthread.so.0(GLIBC_2.0) -
libpython2.7.so.1.0 -
python-module-Numeric -
python-module-libxslt -
python-modules -
python2.7(Numeric) -
python2.7(UserArray) -
python2.7(libxml2) -
python2.7(libxslt) -
python2.7(wxPython) -
rpmlib(PayloadIsLzma) -
rpmlib(SetVersions) -
rtld(GNU_HASH) -

Provides

Name Value
pypop = 0.7.0-alt2_16
python2.7(Arlequin) -
python2.7(DataTypes) -
python2.7(Filter) -
python2.7(GUIApp) -
python2.7(Haplo) -
python2.7(HardyWeinberg) -
python2.7(Homozygosity) -
python2.7(Main) -
python2.7(Meta) -
python2.7(ParseFile) -
python2.7(RandomBinning) -
python2.7(Utils) -
python2.7(_EWSlatkinExact) -
python2.7(_EWSlatkinExactmodule) -
python2.7(_Emhaplofreq) -
python2.7(_Emhaplofreqmodule) -
python2.7(_Gthwe) -
python2.7(_Gthwemodule) -
python2.7(_Pvalue) -
python2.7(_Pvaluemodule) -

Download

Type URL
Binary Package pypop-0.7.0-alt2_16.i586.rpm
Source Package pypop-0.7.0-alt2_16.src.rpm

Install Howto

  1. Add the following line to /etc/apt/sources.list:
    
    rpm [Sisyphus] http://ftp.altlinux.org/pub/distributions/ALTLinux/autoimports/Sisyphus i586 autoimports
    rpm [Sisyphus] http://ftp.altlinux.org/pub/distributions/ALTLinux/autoimports/Sisyphus noarch autoimports
    
  2. Update the package index:
    # sudo apt-get update
  3. Install pypop rpm package:
    # sudo apt-get install pypop

Files

Path
/usr/bin/popmeta
/usr/bin/pypop
/usr/lib/python2.7/site-packages/pypop.pth
/usr/lib/python2.7/site-packages/pypop/Arlequin.py
/usr/lib/python2.7/site-packages/pypop/Arlequin.pyc
/usr/lib/python2.7/site-packages/pypop/Arlequin.pyo
/usr/lib/python2.7/site-packages/pypop/DataTypes.py
/usr/lib/python2.7/site-packages/pypop/DataTypes.pyc
/usr/lib/python2.7/site-packages/pypop/DataTypes.pyo
/usr/lib/python2.7/site-packages/pypop/Filter.py
/usr/lib/python2.7/site-packages/pypop/Filter.pyc
/usr/lib/python2.7/site-packages/pypop/Filter.pyo
/usr/lib/python2.7/site-packages/pypop/GUIApp.py
/usr/lib/python2.7/site-packages/pypop/GUIApp.pyc
/usr/lib/python2.7/site-packages/pypop/GUIApp.pyo
/usr/lib/python2.7/site-packages/pypop/Haplo.py
/usr/lib/python2.7/site-packages/pypop/Haplo.pyc
/usr/lib/python2.7/site-packages/pypop/Haplo.pyo
/usr/lib/python2.7/site-packages/pypop/HardyWeinberg.py
/usr/lib/python2.7/site-packages/pypop/HardyWeinberg.pyc
/usr/lib/python2.7/site-packages/pypop/HardyWeinberg.pyo
/usr/lib/python2.7/site-packages/pypop/Homozygosity.py
/usr/lib/python2.7/site-packages/pypop/Homozygosity.pyc
/usr/lib/python2.7/site-packages/pypop/Homozygosity.pyo
/usr/lib/python2.7/site-packages/pypop/Main.py
/usr/lib/python2.7/site-packages/pypop/Main.pyc
/usr/lib/python2.7/site-packages/pypop/Main.pyo
/usr/lib/python2.7/site-packages/pypop/Meta.py
/usr/lib/python2.7/site-packages/pypop/Meta.pyc
/usr/lib/python2.7/site-packages/pypop/Meta.pyo
/usr/lib/python2.7/site-packages/pypop/ParseFile.py
/usr/lib/python2.7/site-packages/pypop/ParseFile.pyc
/usr/lib/python2.7/site-packages/pypop/ParseFile.pyo
/usr/lib/python2.7/site-packages/pypop/RandomBinning.py
/usr/lib/python2.7/site-packages/pypop/RandomBinning.pyc
/usr/lib/python2.7/site-packages/pypop/RandomBinning.pyo
/usr/lib/python2.7/site-packages/pypop/Utils.py
/usr/lib/python2.7/site-packages/pypop/Utils.pyc
/usr/lib/python2.7/site-packages/pypop/Utils.pyo
/usr/lib/python2.7/site-packages/pypop/_EWSlatkinExactmodule.so
/usr/lib/python2.7/site-packages/pypop/_Emhaplofreqmodule.so
/usr/lib/python2.7/site-packages/pypop/_Gthwemodule.so
/usr/lib/python2.7/site-packages/pypop/_Pvaluemodule.so
/usr/lib/python2.7/site-packages/pypop/pypop-0.7.0-py2.7.egg-info
/usr/share/doc/pypop-0.7.0/AUTHORS
/usr/share/doc/pypop-0.7.0/COPYING
/usr/share/doc/pypop-0.7.0/ChangeLog
/usr/share/doc/pypop-0.7.0/NEWS
/usr/share/doc/pypop-0.7.0/README
/usr/share/doc/pypop-0.7.0/README.slatkin-exact
/usr/share/pypop/VERSION
/usr/share/pypop/common.xsl
/usr/share/pypop/config.ini
/usr/share/pypop/emhaplofreq.xsl
/usr/share/pypop/filter.xsl
/usr/share/pypop/haplolist-by-group.xsl
/usr/share/pypop/hardyweinberg.xsl
/usr/share/pypop/homozygosity.xsl
/usr/share/pypop/html.xsl
/usr/share/pypop/lib.xsl
/usr/share/pypop/meta-to-r.xsl
/usr/share/pypop/phylip-allele.xsl
/usr/share/pypop/phylip-haplo.xsl
/usr/share/pypop/sort-by-locus.xsl
/usr/share/pypop/text.xsl

See Also

Package Description
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pythia8-8.2.15-alt1_7.i586.rpm Pythia Event Generator for High Energy Physics
pythia8-devel-8.2.15-alt1_7.i586.rpm Pythia 8 Development Files
pythia8-lhapdf-8.2.15-alt1_7.i586.rpm Pythia 8 LHAPDF Interface
python-module-PSI-0.3-alt1_0.19.b2.i586.rpm Shows real time system information in python
python-module-PyPAM-0.5.0-alt3_38.i586.rpm PAM bindings for Python
python-module-PySBIG-0.04-alt1_21.i586.rpm PySBIG can read SBIG CCD files
python-module-biopython-1.71-alt1_2.i586.rpm Python tools for computational molecular biology
python-module-bitarray-0.8.3-alt1_1.i586.rpm Efficient Array of Booleans --C Extensions
python-module-cdb-0.34-alt1_18.i586.rpm Constant database library adapted as a python extension module
python-module-cmusphinx3-0.8-alt1_16.i586.rpm Python interface to cmusphinx3
python-module-ctags-1.0.5-alt1_20.i586.rpm A wrapper to read tags library
python-module-dmidecode-3.12.2-alt2_12.i586.rpm Python module to access DMI data
python-module-drizzle-0.08.2-alt1_10.i586.rpm Python wrappers for libdrizzle
python-module-durus-3.9-alt1_18.i586.rpm A Python Object Database
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