ssm - Macromolecular coordinate superposition library

Distribution: ALT Linux Sisyphus
Repository: Autoimports i586
Package name: ssm
Package version: 1.1
Package release: alt1_5
Package architecture: i586
Package type: rpm
Installed size: 168.93 KB
Download size: 168.93 KB
Official Mirror:
SSM is a macromolecular coordinate superposition library, written by Eugene Krissinel. The library implements the SSM algorithm of protein structure comparison in three dimensions, which includes an original procedure of matching graphs built on the protein's secondary-structure elements, followed by an iterative three-dimensional alignment of protein backbone Calpha atoms. The algorithm implemented by the software is described in: E. Krissinel & K. Henrick (2004) Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions. Acta Crystallogr D Biol Crystallogr. 60, 2256-68. This package contains the shared library components needed for programs that have been compiled with the ssm library.



  • ssm = 1.1-alt1_5


    Binary package: ssm-1.1-alt1_5.i586.rpm
    Source package: ssm-1.1-alt1_5.src.rpm

    Install Howto

    1. Add the following line to /etc/apt/sources.list:
      rpm [Sisyphus] i586 autoimports
      rpm [Sisyphus] noarch autoimports
    2. Update the package index:
      # sudo apt-get update
    3. Install ssm rpm package:
      # sudo apt-get install ssm


    • /usr/lib/
    • /usr/lib/
    • /usr/share/doc/ssm-1.1/AUTHORS
    • /usr/share/doc/ssm-1.1/COPYING
    • /usr/share/doc/ssm-1.1/README