perl-AlignDB-Codon-1.1.1-alt1.noarch.rpm


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Description

perl-AlignDB-Codon - translate sequences and calculate Dn/Ds

Property Value
Distribution ALT Linux Sisyphus
Repository Autoimports noarch
Package name perl-AlignDB-Codon
Package version 1.1.1
Package release alt1
Package architecture noarch
Package type rpm
Installed size 40.95 KB
Download size 40.95 KB
Official Mirror ftp.altlinux.org
AlignDB::Codon provides methods to translate sequences and calculate Dn/Ds with different codon
tables.
Some parts of this module are extracted from BioPerl to avoid the huge number of its dependencies.

Alternatives

Package Version Architecture Repository
perl-AlignDB-Codon - - -

Requires

Name Value
/usr/share/perl5 -
perl(AlignDB/IntSpan.pm) -
perl(List/MoreUtils/PP.pm) -
perl(Moose.pm) -
perl(YAML/Syck.pm) -
rpmlib(PayloadIsLzma) -

Provides

Name Value
perl(AlignDB/Codon.pm) = 1.001.001
perl-AlignDB-Codon = 1.1.1-alt1

Download

Type URL
Binary Package perl-AlignDB-Codon-1.1.1-alt1.noarch.rpm
Source Package perl-AlignDB-Codon-1.1.1-alt1.src.rpm

Install Howto

  1. Add the following line to /etc/apt/sources.list:
    
    rpm [Sisyphus] http://ftp.altlinux.org/pub/distributions/ALTLinux/autoimports/Sisyphus noarch autoimports
    rpm [Sisyphus] http://ftp.altlinux.org/pub/distributions/ALTLinux/autoimports/Sisyphus noarch autoimports
    
  2. Update the package index:
    # sudo apt-get update
  3. Install perl-AlignDB-Codon rpm package:
    # sudo apt-get install perl-AlignDB-Codon

Files

Path
/usr/share/doc/perl-AlignDB-Codon-1.1.1/Changes
/usr/share/doc/perl-AlignDB-Codon-1.1.1/LICENSE
/usr/share/doc/perl-AlignDB-Codon-1.1.1/README.md
/usr/share/perl5/AlignDB/Codon.pm

See Also

Package Description
perl-AlignDB-DeltaG-1.1.0-alt1.noarch.rpm Calculate deltaG of polymer DNA sequences
perl-AlignDB-GC-1.1.0-alt1.noarch.rpm GC-related analysises
perl-AlignDB-IntSpan-1.1.1-alt1.noarch.rpm Handling of sets containing integer spans
perl-AlignDB-Run-1.0.2-alt1.noarch.rpm Run in parallel without pains
perl-AlignDB-SQL-1.0.2-alt1.noarch.rpm An SQL statement generator
perl-AlignDB-Stopwatch-1.1.0-alt1.noarch.rpm Record running time and print standard messages
perl-AlignDB-ToXLSX-1.2.1-alt1.noarch.rpm Create xlsx files from arrays or SQL queries
perl-AlignDB-Window-1.1.0-alt1.noarch.rpm Split integer spans into a series of windows
perl-Alister-Base-Sums-1.05-alt1.noarch.rpm subroutines for managing a sum disgest database table
perl-AllKnowingDNS-1.7-alt1.noarch.rpm ARRAY(0x1f70780)
perl-AllKnowingDNS-scripts-1.7-alt1.noarch.rpm AllKnowingDNS scripts
perl-Alt-0.19-alt1.noarch.rpm Alternate Module Implementations
perl-Alt-Alien-cmake3-System-0.0402-alt1.noarch.rpm Simplified alternative to Alien::cmake3 that uses system cmake
perl-Alt-Base-0.02-alt1.noarch.rpm Base class for alternate module
perl-Alt-CPAN-Uploader-tinyua-0.000001-alt1.1.noarch.rpm because we are too hip to use LWP::UserAgent
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