perl-Bio-PDB-Structure - Perl module for parsing and manipulating Protein Databank (PDB) files

Property Value
Distribution ALT Linux Sisyphus
Repository Autoimports noarch
Package name perl-Bio-PDB-Structure
Package version 0.02
Package release alt2
Package architecture noarch
Package type rpm
Installed size 37.41 KB
Download size 37.41 KB
Official Mirror
This module combines tools that are commonly used to analyze proteins and
nucleic acids from a pdb file stuctures. The main benefits of using the module
are its ability to parse and print out a pdb structure with minimum effort.
However in addition to that it is possible to do structural alignments, RMSD
calculations, atom editons, center of mass calculations, molecule editions
and so forth. Both Atom objects and Molecule objects are defined within
this module.


Package Version Architecture Repository
perl-Bio-PDB-Structure - - -


Name Value
/usr/share/perl5 -
perl(Math/ -
perl-base >= 1:5.12.3
rpmlib(PayloadIsLzma) -


Name Value
perl(Bio/PDB/ -
perl-Bio-PDB-Structure = 0.02-alt2


Type URL
Binary Package perl-Bio-PDB-Structure-0.02-alt2.noarch.rpm
Source Package perl-Bio-PDB-Structure-0.02-alt2.src.rpm

Install Howto

  1. Add the following line to /etc/apt/sources.list:
    rpm [Sisyphus] noarch autoimports
    rpm [Sisyphus] noarch autoimports
  2. Update the package index:
    # sudo apt-get update
  3. Install perl-Bio-PDB-Structure rpm package:
    # sudo apt-get install perl-Bio-PDB-Structure



See Also

Package Description
perl-Bio-PrimerDesigner-0.07-alt1.noarch.rpm Design PCR primers using primer3 and epcr
perl-Bio-PrimerDesigner-scripts-0.07-alt1.noarch.rpm Bio-PrimerDesigner scripts
perl-Bio-Protease-1.112980-alt1.noarch.rpm perl module Bio-Protease
perl-Bio-RNA-SpliceSites-Scoring-MaxEntScan-0.05-alt1.noarch.rpm Perl module for pre-mRNA splice site scoring by the maxEntScan algorithm of Gene Yeo and Chris Burg
perl-Bio-Regexp-0.101-alt1.noarch.rpm Exhaustive DNA/RNA/protein regexp searches
perl-Bio-Resistome-1.123560-alt1.noarch.rpm Antibiotic resistome gene database
perl-Bio-Resistome-scripts-1.123560-alt1.noarch.rpm Bio-Resistome scripts
perl-Bio-SAGE-Comparison-1.00-alt1.noarch.rpm Compares data from serial analysis of gene expression (SAGE) libraries
perl-Bio-SAGE-DataProcessing-1.20-alt1.noarch.rpm Processes raw serial analysis of gene expression (SAGE) data
perl-Bio-SDRS-0.11-alt1.noarch.rpm Perl extension for Sigmoidal Dose Response Search, a tool
perl-Bio-SDRS-scripts-0.11-alt1.noarch.rpm Bio-SDRS scripts
perl-Bio-SFF-0.007-alt1.noarch.rpm Standard Flowgram Format for Perl
perl-Bio-SSRTool-0.04-alt1.noarch.rpm The great new Bio::SSRTool!
perl-Bio-SeqHash-0.1.4-alt1.noarch.rpm get one or more sequences from a FASTA file quickly
perl-Bio-SeqReader-0.1.3-alt2_9.noarch.rpm Class providing methods for representing header,