bwa-0.7.15-alt1_9.x86_64.rpm


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Description

bwa - Burrows-Wheeler Alignment tool

Property Value
Distribution ALT Linux Sisyphus
Repository Autoimports x86_64 Official
Package filename bwa-0.7.15-alt1_9.x86_64.rpm
Package name bwa
Package version 0.7.15
Package release alt1_9
Package architecture x86_64
Package type rpm
Homepage -
License -
Maintainer -
Download size 496.04 KB
Installed size 496.04 KB
Category
BWA is a program for aligning sequencing reads against a large
reference genome (e.g. human genome). It has two major components, one
for read shorter than 150bp and the other for longer reads.

Alternatives

Package Version Architecture Repository
bwa All All All

Requires

Name Value
/bin/bash -
/lib64/ld-linux-x86-64.so.2 -
/usr/bin/env -
coreutils -
findutils -
gawk -
grep -
gzip -
libc.so.6(GLIBC_2.14)(64bit) -
libc.so.6(GLIBC_2.15)(64bit) -
libc.so.6(GLIBC_2.2.5)(64bit) -
libc.so.6(GLIBC_2.3)(64bit) -
libc.so.6(GLIBC_2.3.4)(64bit) -
libc.so.6(GLIBC_2.4)(64bit) -
libc.so.6(GLIBC_2.7)(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -
libpthread.so.0(GLIBC_2.2.5)(64bit) -
libpthread.so.0(GLIBC_2.3.2)(64bit) -
librt.so.1(GLIBC_2.2.5)(64bit) -
libz.so.1()(64bit) -
make -
perl(Getopt/Std.pm) -
perl-base -
rpmlib(PayloadIsLzma) -
rpmlib(SetVersions) -
rtld(GNU_HASH) -
sed -
sh -
wget -

Provides

Name Value
bwa = 0.7.15-alt1_9

Download

Type URL
Mirror ftp.altlinux.org
Binary Package bwa-0.7.15-alt1_9.x86_64.rpm
Source Package bwa-0.7.15-alt1_9.src.rpm

Install Howto

  1. Add the following line to /etc/apt/sources.list:
    
    rpm [Sisyphus] http://ftp.altlinux.org/pub/distributions/ALTLinux/autoimports/Sisyphus x86_64 autoimports
    rpm [Sisyphus] http://ftp.altlinux.org/pub/distributions/ALTLinux/autoimports/Sisyphus noarch autoimports
    
  2. Update the package index:
    # sudo apt-get update
  3. Install bwa rpm package:
    # sudo apt-get install bwa

Files

Path
/usr/bin/README.md
/usr/bin/bwa
/usr/bin/bwa-postalt.js
/usr/bin/qualfa2fq.pl
/usr/bin/run-HLA
/usr/bin/run-bwamem
/usr/bin/run-gen-ref
/usr/bin/typeHLA-selctg.js
/usr/bin/typeHLA.js
/usr/bin/typeHLA.sh
/usr/bin/xa2multi.pl
/usr/share/doc/bwa-0.7.15/COPYING
/usr/share/doc/bwa-0.7.15/NEWS.md
/usr/share/doc/bwa-0.7.15/README-alt.md
/usr/share/doc/bwa-0.7.15/README.md
/usr/share/man/man1/bwa.1.xz

See Also

Package Description
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bwbasic-3.20-alt1_2.x86_64.rpm A Basic interpreter
bwm-ng-0.6.2-alt1_2.x86_64.rpm Console-based live network and disk io bandwidth monitor
byacc-1.9.20120115-alt1_2.x86_64.rpm Berkeley Yacc, a parser generator
byzanz-0.3-alt1_0.git201402246.x86_64.rpm A desktop recorder
c-graph-2.0.1-alt1_2.x86_64.rpm Convolution Graph
cagibi-0.2.0-alt1_18.x86_64.rpm SSDP (UPnP discovery) cache/proxy daemon
calc-2.12.7.2-alt1_4.x86_64.rpm Arbitrary precision arithmetic system and calculator
calc-devel-2.12.7.2-alt1_4.x86_64.rpm Development files for the calc arithmetic system
calc-libs-2.12.7.2-alt1_4.x86_64.rpm Libraries for the calc arithmetic system
calc-stdrc-2.12.7.2-alt1_4.x86_64.rpm Standard resource files the calc arithmetic system
calendar-1.37-alt1_1.20190827cvs.x86_64.rpm Reminder utility
callgit-2.0-alt1_23.x86_64.rpm A tool for Ham Radio Operators to look up call-signs on the web
caml2html-1.4.4-alt5_5.x86_64.rpm Highlight OCaml code by adding some color
camorama-0.20.7-alt1_3.x86_64.rpm Gnome webcam viewer
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