fastx_toolkit-galaxy-0.0.14-alt2_23.x86_64.rpm


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Description

fastx_toolkit-galaxy - Integrate fastx_toolkit with a local Galaxy installation

Property Value
Distribution ALT Linux Sisyphus
Repository Autoimports x86_64
Package filename fastx_toolkit-galaxy-0.0.14-alt2_23.x86_64.rpm
Package name fastx_toolkit-galaxy
Package version 0.0.14
Package release alt2_23
Package architecture x86_64
Package type rpm
Category Engineering
Homepage -
License -
Maintainer -
Download size 429.85 KB
Installed size 429.85 KB
These files allow the integration of fastx_toolkit with a local
installation of Galaxy (http://main.g2.bx.psu.edu/), a web-based
platform for analyzing multiple alignments, comparing genomic
annotations, profiling metagenomic samples and much more.

Alternatives

Package Version Architecture Repository
fastx_toolkit-galaxy-0.0.14-alt2_23.i586.rpm 0.0.14 i586 Autoimports
fastx_toolkit-galaxy - - -

Requires

Name Value
fastx_toolkit = 0.0.14-alt2_23
rpmlib(PayloadIsLzma) -

Provides

Name Value
fastx_toolkit-galaxy = 0.0.14-alt2_23

Download

Type URL
Mirror ftp.altlinux.org
Binary Package fastx_toolkit-galaxy-0.0.14-alt2_23.x86_64.rpm
Source Package fastx_toolkit-0.0.14-alt2_23.src.rpm

Install Howto

  1. Add the following line to /etc/apt/sources.list:
    
    rpm [Sisyphus] http://ftp.altlinux.org/pub/distributions/ALTLinux/autoimports/Sisyphus x86_64 autoimports
    rpm [Sisyphus] http://ftp.altlinux.org/pub/distributions/ALTLinux/autoimports/Sisyphus noarch autoimports
    
  2. Update the package index:
    # sudo apt-get update
  3. Install fastx_toolkit-galaxy rpm package:
    # sudo apt-get install fastx_toolkit-galaxy

Files

Path
/usr/share/fastx_toolkit/
/usr/share/fastx_toolkit/galaxy/Makefile
/usr/share/fastx_toolkit/galaxy/README
/usr/share/fastx_toolkit/galaxy/fastx_toolkit_conf.xml
/usr/share/fastx_toolkit/galaxy/static/Makefile
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/Makefile
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/barcode_splitter_output_example.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fasta_clipping_histogram_1.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fasta_clipping_histogram_2.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fasta_clipping_histogram_3.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fasta_clipping_histogram_4.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fastq_nucleotides_distribution_1.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fastq_nucleotides_distribution_2.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fastq_nucleotides_distribution_3.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fastq_nucleotides_distribution_4.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fastq_nucleotides_distribution_line_graph.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fastq_quality_boxplot_1.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fastq_quality_boxplot_2.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fastq_quality_boxplot_3.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fastx_clipper_example.png
/usr/share/fastx_toolkit/galaxy/static/fastx_icons/fastx_clipper_illustration.png
/usr/share/fastx_toolkit/galaxy/test-data/Makefile
/usr/share/fastx_toolkit/galaxy/test-data/fasta_collapser1.fasta
/usr/share/fastx_toolkit/galaxy/test-data/fasta_collapser1.out
/usr/share/fastx_toolkit/galaxy/test-data/fasta_formatter1.fasta
/usr/share/fastx_toolkit/galaxy/test-data/fasta_formatter1.out
/usr/share/fastx_toolkit/galaxy/test-data/fasta_formatter2.out
/usr/share/fastx_toolkit/galaxy/test-data/fasta_nuc_changer1.fasta
/usr/share/fastx_toolkit/galaxy/test-data/fasta_nuc_changer1.out
/usr/share/fastx_toolkit/galaxy/test-data/fasta_nuc_changer2.fasta
/usr/share/fastx_toolkit/galaxy/test-data/fasta_nuc_changer2.out
/usr/share/fastx_toolkit/galaxy/test-data/fastq_qual_conv1.fastq
/usr/share/fastx_toolkit/galaxy/test-data/fastq_qual_conv1.out
/usr/share/fastx_toolkit/galaxy/test-data/fastq_qual_conv1a.out
/usr/share/fastx_toolkit/galaxy/test-data/fastq_qual_conv2.fastq
/usr/share/fastx_toolkit/galaxy/test-data/fastq_qual_conv2.out
/usr/share/fastx_toolkit/galaxy/test-data/fastq_qual_conv2n.out
/usr/share/fastx_toolkit/galaxy/test-data/fastq_qual_filter1.fastq
/usr/share/fastx_toolkit/galaxy/test-data/fastq_qual_filter1a.out
/usr/share/fastx_toolkit/galaxy/test-data/fastq_qual_filter1b.out
/usr/share/fastx_toolkit/galaxy/test-data/fastq_stats1.fastq
/usr/share/fastx_toolkit/galaxy/test-data/fastq_stats1.out
/usr/share/fastx_toolkit/galaxy/test-data/fastq_to_fasta1.fastq
/usr/share/fastx_toolkit/galaxy/test-data/fastq_to_fasta1a.out
/usr/share/fastx_toolkit/galaxy/test-data/fastq_to_fasta1b.out
/usr/share/fastx_toolkit/galaxy/test-data/fastx_artifacts1.fasta
/usr/share/fastx_toolkit/galaxy/test-data/fastx_artifacts1.out
/usr/share/fastx_toolkit/galaxy/test-data/fastx_artifacts2.fastq
/usr/share/fastx_toolkit/galaxy/test-data/fastx_artifacts2.out
/usr/share/fastx_toolkit/galaxy/test-data/fastx_barcode_splitter1.fastq
/usr/share/fastx_toolkit/galaxy/test-data/fastx_barcode_splitter1.out
/usr/share/fastx_toolkit/galaxy/test-data/fastx_barcode_splitter1.txt
/usr/share/fastx_toolkit/galaxy/test-data/fastx_clipper1.fastq
/usr/share/fastx_toolkit/galaxy/test-data/fastx_clipper1a.out
/usr/share/fastx_toolkit/galaxy/test-data/fastx_rev_comp1.fasta
/usr/share/fastx_toolkit/galaxy/test-data/fastx_rev_comp2.fastq
/usr/share/fastx_toolkit/galaxy/test-data/fastx_reverse_complement1.out
/usr/share/fastx_toolkit/galaxy/test-data/fastx_reverse_complement2.out
/usr/share/fastx_toolkit/galaxy/test-data/fastx_trimmer1.fasta
/usr/share/fastx_toolkit/galaxy/test-data/fastx_trimmer1.out
/usr/share/fastx_toolkit/galaxy/test-data/fastx_trimmer2.fastq
/usr/share/fastx_toolkit/galaxy/test-data/fastx_trimmer2.out
/usr/share/fastx_toolkit/galaxy/tool-data/Makefile
/usr/share/fastx_toolkit/galaxy/tool-data/fastx_clipper_sequences.txt
/usr/share/fastx_toolkit/galaxy/tools/Makefile
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/Makefile
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fasta_clipping_histogram.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fasta_formatter.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fasta_nucleotide_changer.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastq_masker.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastq_quality_boxplot.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastq_quality_converter.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastq_quality_filter.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastq_quality_trimmer.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastq_to_fasta.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_artifacts_filter.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_barcode_splitter.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_barcode_splitter_galaxy_wrapper.sh
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_clipper.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_collapser.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_nucleotides_distribution.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_nucleotides_distribution_line.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_quality_statistics.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_renamer.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_reverse_complement.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_trimmer.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_trimmer_from_end.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/fastx_uncollapser.xml
/usr/share/fastx_toolkit/galaxy/tools/fastx_toolkit/seqid_uncollapser.xml

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fcitx-anthy-0.2.2-alt1_9.x86_64.rpm Anthy Engine for Fcitx
fcitx-configtool-0.4.10-alt2_2.x86_64.rpm Gtk configuretool for Fcitx
fcitx-hangul-0.3.1-alt1_7.x86_64.rpm Hangul Engine for Fcitx
fcitx-skk-0.1.0-alt1_14.x86_64.rpm Japanese SKK (Simple Kana Kanji) Engine for Fcitx
fcitx-unikey-0.2.7-alt1_6.x86_64.rpm Vietnamese Engine for Fcitx
fcode-utils-1.0.2-alt1_21.svn1354.x86_64.rpm Utilities for dealing with FCode
fcoe-utils-1.0.32-alt1_2.x86_64.rpm Fibre Channel over Ethernet utilities
feff-1.10.1-alt1_1.x86_64.rpm Front-end for FFmpeg
fetchlog-1.4-alt1_16.x86_64.rpm Utility to display new messages of a logfile since last run
fex-2.0.0-alt1_9.x86_64.rpm Field split/extraction like cut/awk
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