hmmer-3.1b2-alt1_12.x86_64.rpm


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Description

hmmer - Profile HMM software for protein sequence analysis

Property Value
Distribution ALT Linux Sisyphus
Repository Autoimports x86_64
Package filename hmmer-3.1b2-alt1_12.x86_64.rpm
Package name hmmer
Package version 3.1b2
Package release alt1_12
Package architecture x86_64
Package type rpm
Category Engineering
Homepage -
License -
Maintainer -
Download size 11.28 MB
Installed size 11.28 MB
Profile hidden Markov models (profile HMMs) can be used to do sensitive
database searching using statistical descriptions of a sequence family's
consensus.  HMMER is a freely distributable implementation of profile HMM
software for protein sequence analysis.

Alternatives

Package Version Architecture Repository
hmmer-3.1b2-alt1_12.i586.rpm 3.1b2 i586 Autoimports
hmmer - - -

Requires

Name Value
/lib64/ld-linux-x86-64.so.2 -
libc.so.6(GLIBC_2.11)(64bit) -
libc.so.6(GLIBC_2.14)(64bit) -
libc.so.6(GLIBC_2.15)(64bit) -
libc.so.6(GLIBC_2.2.5)(64bit) -
libc.so.6(GLIBC_2.3)(64bit) -
libc.so.6(GLIBC_2.3.4)(64bit) -
libc.so.6(GLIBC_2.4)(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -
libm.so.6(GLIBC_2.27)(64bit) -
libpthread.so.0(GLIBC_2.2.5)(64bit) -
libpthread.so.0(GLIBC_2.3.2)(64bit) -
rpmlib(PayloadIsLzma) -
rtld(GNU_HASH) -

Provides

Name Value
hmmer = 3.1b2-alt1_12

Download

Type URL
Mirror ftp.altlinux.org
Binary Package hmmer-3.1b2-alt1_12.x86_64.rpm
Source Package hmmer-3.1b2-alt1_12.src.rpm

Install Howto

  1. Add the following line to /etc/apt/sources.list:
    
    rpm [Sisyphus] http://ftp.altlinux.org/pub/distributions/ALTLinux/autoimports/Sisyphus x86_64 autoimports
    rpm [Sisyphus] http://ftp.altlinux.org/pub/distributions/ALTLinux/autoimports/Sisyphus noarch autoimports
    
  2. Update the package index:
    # sudo apt-get update
  3. Install hmmer rpm package:
    # sudo apt-get install hmmer

Files

Path
/usr/bin/alimask
/usr/bin/hmmalign
/usr/bin/hmmbuild
/usr/bin/hmmc2
/usr/bin/hmmconvert
/usr/bin/hmmemit
/usr/bin/hmmerfm-exactmatch
/usr/bin/hmmfetch
/usr/bin/hmmlogo
/usr/bin/hmmpgmd
/usr/bin/hmmpress
/usr/bin/hmmscan
/usr/bin/hmmsearch
/usr/bin/hmmsim
/usr/bin/hmmstat
/usr/bin/jackhmmer
/usr/bin/makehmmerdb
/usr/bin/nhmmer
/usr/bin/nhmmscan
/usr/bin/phmmer
/usr/share/doc/hmmer-3.1b2/LICENSE
/usr/share/man/man1/alimask.1.xz
/usr/share/man/man1/hmmalign.1.xz
/usr/share/man/man1/hmmbuild.1.xz
/usr/share/man/man1/hmmconvert.1.xz
/usr/share/man/man1/hmmemit.1.xz
/usr/share/man/man1/hmmer.1.xz
/usr/share/man/man1/hmmfetch.1.xz
/usr/share/man/man1/hmmlogo.1.xz
/usr/share/man/man1/hmmpgmd.1.xz
/usr/share/man/man1/hmmpress.1.xz
/usr/share/man/man1/hmmscan.1.xz
/usr/share/man/man1/hmmsearch.1.xz
/usr/share/man/man1/hmmsim.1.xz
/usr/share/man/man1/hmmstat.1.xz
/usr/share/man/man1/jackhmmer.1.xz
/usr/share/man/man1/makehmmerdb.1.xz
/usr/share/man/man1/nhmmer.1.xz
/usr/share/man/man1/nhmmscan.1.xz
/usr/share/man/man1/phmmer.1.xz

See Also

Package Description
hmmer-devel-3.1b2-alt1_12.x86_64.rpm Library and header files to include hmmer code in other apps
hokuyoaist-3.0.2-alt3_25.x86_64.rpm Hokuyo Laser SCIP driver
hokuyoaist-devel-3.0.2-alt3_25.x86_64.rpm Header files and libraries for hokuyoaist
honeyd-1.5c-alt3_21.x86_64.rpm Honeypot daemon
horst-3.0-alt1_6.x86_64.rpm A highly optimized radio scanning tool
hotot-common-0.9.9-alt1_3.20121215gitcaad812.x86_64.rpm Lightweight & open source micro blogging client
hotot-gtk-0.9.9-alt1_3.20121215gitcaad812.x86_64.rpm Lightweight & open source micro blogging client
hotot-qt-0.9.9-alt1_3.20121215gitcaad812.x86_64.rpm Lightweight & open source micro blogging client
howl-0.6-alt1_11.x86_64.rpm Lightweight editor with a keyboard-centric minimalistic UI
hpic-0.53.1-alt2_2.x86_64.rpm Healpix manipulation binaries and library
hpic-devel-0.53.1-alt2_2.x86_64.rpm Headers required when building programs against hpic
hso-rezero-0.1-alt1_19.x86_64.rpm Tools for Option 3G cards
hstr-1.22-alt1_9.x86_64.rpm Suggest box like shell history completion
ht-editor-2.0.22-alt1_7.x86_64.rpm File editor/viewer/analyzer for executables
htmlcxx-0.87-alt1_1.x86_64.rpm htmlcxx is a simple non-validating css1 and html parser for C++
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