greedy - Very fast greedy diffeomorphic registration code

Property Value
Distribution ALT Linux Sisyphus
Repository Classic x86_64
Package filename greedy-1.0.1-alt1.git79e69e3.x86_64.rpm
Package name greedy
Package version 1.0.1
Package release alt1.git79e69e3
Package architecture x86_64
Package type rpm
Category Sciences/Medicine
Homepage -
License -
Maintainer -
Download size 66.78 KB
Installed size 66.78 KB
Greedy is a tool for fast medical image registration.
It was developed by Paul Yushkevich
at the Penn Image Computing and Science Lab at the University of Pennsylvania.
The motivation for developing greedy was to have a really fast
CPU-based deformable image registration tool that could be used in applications
where many images have to be registered in parallel
- like multi-atlas image segmentation.
Greedy borrows many concepts (and some implementation strategies)
from the Symmetric Normalization (SyN) in ANTS.
But greedy is non-symmetric, which makes it faster
(in applications like multi-atlas segmentation,
symmetric property is not required).
Greedy also uses highly optimized code for
image metric computation that adds extra speed.
This work is funded by the NIH/NIBIB under
grants R01 EB-017255 and R01 EB-014146
Main Features
- Greedy diffeomorphic image registration
- Affine and rigid image registration (also, matching by moments of inertia)
- Support for normalized cross-correlation, mutual information, and sum of squared differences metrics
- Multiple images and multi-component images can be registered
- Fast CPU-based implementation (takes advantage of multi-threading and SIMD)
- Supports 2D and 3D registration
- Masks can be supplied for restricting registration to a region
- Supports NIFTI image format
- Single executable for registration and image/mesh re-slicing
- High-level API that can be called from other software (e.g., ITK-SNAP)
- Free open-source software (licensed under GPL3)
- It works!


Package Version Architecture Repository
greedy-1.0.1-alt1.git79e69e3.i586.rpm 1.0.1 i586 Classic
greedy - - -


Name Value
/lib64/ - -
libgreedy = 1.0.1-alt1.git79e69e3:sisyphus+234888.1400.9.3 - -
rpmlib(PayloadIsLzma) -


Name Value
greedy = 1.0.1-alt1.git79e69e3:sisyphus+234888.1400.9.3


Type URL
Binary Package greedy-1.0.1-alt1.git79e69e3.x86_64.rpm
Source Package greedy-1.0.1-alt1.git79e69e3.src.rpm

Install Howto

  1. Add the following line to /etc/apt/sources.list:
    rpm [Sisyphus] x86_64 classic
    rpm [Sisyphus] noarch classic
  2. Update the package index:
    # sudo apt-get update
  3. Install greedy rpm package:
    # sudo apt-get install greedy




2019-07-17 - Aleksei Nikiforov <> 1.0.1-alt1.git79e69e3
- Initial build for ALT.

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